Oncofusion

start / graph / localization-dot1l-nucleus-measured-cytoplasm-by-similarity

Mechanismmoderate confidence 3 of 5: One strong study, or several smaller consistent ones.Q57-localization2

DOT1L's localization record is a mouse kidney paper wearing a human label - and the one image of it in a leukaemia cell is a supporting figure a title search cannot see

also called DOT1L subcellular localization · Dot1a nuclear export · AF17 MLLT6 Dot1a cytoplasm · DOT1L peri-nucleolar

DOT1L is the enzyme every KMT2A-fusion leukaemia depends on, and the database entry saying it can be in the cytoplasm is not a human measurement at all: it is copied across from mouse kidney cells, where over-expressing a partner protein pushed the mouse enzyme out of the nucleus. The only picture of DOT1L inside a leukaemia cell is a supporting panel in a paper about something else.

The same thing, for a scientist

UniProt Q8TEK3 lists DOT1L as `Nucleus` (ECO:0000269, PubMed 15851025) and `Cytoplasm` (ECO:0000250, i.e. BY SIMILARITY to mouse Q6XZL8), with the note that cytoplasmic localisation is dependent on and mediated by MLLT6/AF17 [E1]. Tracing the similarity chain: the mouse annotation rests on PubMed 22087315, in which AF17 overexpression in **mouse cortical collecting duct M-1 cells** drove Dot1a into the cytoplasm in a leptomycin-B-sensitive (CRM1-dependent) manner, and AF17 knockdown caused nuclear accumulation [E2]. The nuclear localisation of mouse Dot1a was shown by colocalisation with AF9 in nuclei of **mouse mIMCD3 renal collecting duct cells** [E3]. The only sub-nuclear positional data anywhere is a proximity-ligation assay between FLAG-DOT1L and NPM1 read out against fibrillarin and lamin B1 in **mouse N2a neuroblastoma overexpressing DOT1L**, placing the interaction at peri-nucleolar heterochromatin [E4]. The human `Nucleus` citation is a leukaemia paper whose abstract reports no localisation experiment and whose full text is unreadable by all five routes [E5]. **And the absence this entry originally recorded was false**: a rule-80 check opened the one near-miss record and found a DOT1L immunofluorescence panel in **THP-1 (KMT2A::MLLT3) human leukaemia cells**, placing endogenous DOT1L in the nucleus co-localised with LAMP5-AS1 RNA at the LAMP5 locus [E7]. What remains absent is narrower and is stated as such [E6].

Go deeper
What the database actually says, read with its evidence codes

Fetched from UniProt REST on 2026-09-20:

SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:15851025}.
                      Cytoplasm {ECO:0000250|UniProtKB:Q6XZL8}.
Note=Cytoplasmic localization is dependent on and mediated by MLLT6/AF17.
     {ECO:0000250|UniProtKB:Q6XZL8}

ECO:0000250 is 'inferred from sequence or structural similarity' - a curator transferring an annotation from another entry, not a measurement in this protein. The source entry is Q6XZL8, mouse Dot1l. So the human cytoplasmic pool is, in the database, an inference from mouse. Copying this line into a human leukaemia entry - which is precisely what a bulk import would do - manufactures a human cytoplasmic DOT1L pool that nobody has measured.

Following the similarity chain to its source, and what the source is about

The mouse entry Q6XZL8 carries Cytoplasm {ECO:0000269|PubMed:22087315} and the same note with the same PMID. That paper is about sodium transport in the kidney 2:

  • system: mouse cortical collecting duct M-1 cells, plus 293T and AF17-null mice in the authors' prior work;
  • perturbation: overexpression of AF17, and siRNA depletion of AF17;
  • result: AF17 overexpression gave "preferential distribution of Dot1a in the cytoplasm", blocked by leptomycin B; AF17 knockdown gave nuclear accumulation;
  • the functional readout is ENaC subunit expression and benzamil-sensitive Na+ transport.

So the cytoplasmic pool is (i) mouse, (ii) renal epithelium, (iii) an overexpression phenotype, and (iv) CRM1-dependent. Every one of those belongs in the claim, not the caveat.

The CRM1 detail is the one worth carrying forward. This graph already holds mechanism-calm-af10-crm1-nuclear-export-requirement: CALM-AF10 leukaemogenesis requires a CRM1-dependent nuclear export signal, and AF10 is a DOT1L-binding partner. Leptomycin B sensitivity of Dot1a export means the methyltransferase itself is a CRM1 cargo when a partner supplies the signal. Whether the CALM-derived NES drags DOT1L with the fusion, or merely moves the fusion, has never been asked.

The only subnuclear position: peri-nucleolar, in mouse neuroblastoma, overexpressed

Izzo et al. asked where the DOT1L-NPM1 interaction happens 4. Their assay is a proximity ligation assay between FLAG (tagging overexpressed DOT1L) and NPM1, followed by a third antibody marking a compartment - fibrillarin (ab184817) for the nucleolus or lamin B1 (ab133741) for the nuclear periphery. Immuno-FISH against major satellite (mSat) repeats then showed that NPM1 knockdown changes the number and size of peri-nucleolar mSat foci, and DOT1L overexpression does too.

The assignment is therefore: DOT1L engages NPM1 at peri-nucleolar heterochromatin, and perturbing either reorganises that compartment. Notably, the same paper reports the converse negative: neither DOT1L overexpression nor DOT1L inhibition with EPZ5676 altered NPM1 localisation (their Fig. S7E, S7F). So the traffic is one-way in these data.

System: mouse Neuro-2a neuroblastoma, transfected, puromycin-selected, DOT1L overexpressed and FLAG-tagged. That is three steps from infant B-lineage KMT2A::AFF1, and NPM1 is itself a gene whose cytoplasmic mislocalisation defines a different AML subtype - so the compartment being described here is one this disease's literature already cares about for an unrelated reason.

The human nuclear citation cannot be read

UniProt's experimental evidence for human DOT1L being nuclear is PMID 15851025 - Okada et al., hDOT1L links histone methylation to leukemogenesis, Cell 2005. Its abstract describes the AF10 interaction, MLL-hDOT1L fusion transformation and H3K79 hypermethylation, and contains no localisation experiment. Whatever the imaging is, it is in the body of the paper.

All five routes from the brief were run on 2026-09-20 and all five failed: Europe PMC returns no PMCID; efetch db=pubmed shows no <ArticleId IdType="pmc">; routes 2-4 are therefore structurally unavailable; and route 5, https://doi.org/10.1016/j.cell.2005.02.020, returned an 11-character redirect stub - the documented Elsevier failure mode. This entry therefore records that the human nuclear annotation has an experimental source and that we did not read it, which is a different statement from either accepting or doubting it.

The absence I recorded was false, and how it was caught

This section replaces a claim this entry made earlier in the same session, and the replacement is the point.

The original text read: no published study reports the subcellular or subnuclear localisation of DOT1L protein in a KMT2A-rearranged cell. The query was well formed and the control was clean: the bare imaging operand DOT1L[tiab] AND (immunofluorescence[tiab] OR confocal[tiab]) returns 12, so the instrument returns ones; adding the leukaemia term returned 1, PMID 38374003, which I title-checked and judged off-topic because its title is about a lncRNA-DOT1L-LAMP5 axis and autophagic degradation of MLL fusion proteins.

Rule 80 says a PubMed zero is bounded by abstracts, not by papers. Opening that one record's full text found, in its methods and its Figure 4h: "FISH and immunofluorescence experiments also revealed that LAMP5-AS1 co-localized with both DOT1L protein and the LAMP5 locus within the cell nucleus" - in THP-1 cells, which carry KMT2A::MLLT3 (MLL-AF9) - with DOT1L primary antibody CST #90878S, detected on a Zeiss LSM7 DUO confocal 7.

So endogenous DOT1L has been imaged in a KMT2A-rearranged human leukaemia cell, and it is nuclear. The title-check was the failure: the panel is a supporting experiment for a claim about an lncRNA, and no part of the title or abstract announces it. That is exactly the shape rule 80 describes, and localisation is the field where it bites hardest, because a localisation panel is almost always somebody else's supporting figure.

What is still absent, stated narrowly 6: no study is about DOT1L localisation in a KMT2A-rearranged cell; nobody has co-stained DOT1L with a subnuclear compartment marker (nucleolus, speckle, PML body, lamina) in one; and nobody has asked whether DOT1L has a cytoplasmic pool in a blast, which is the question the by-similarity annotation raises. Those are narrower claims than the one they replace, and they are what the searching actually supports.

Facts and figures
genegene-dot1l
uniprotQ8TEK3
length AA1537
compartment subcellularnucleus - and now measured in the disease: endogenous DOT1L is nuclear in THP-1 (KMT2A::MLLT3) human leukaemia cells by FISH plus immunofluorescence (PMID 38374003, Fig. 4h, antibody CST #90878S). The human UniProt nuclear annotation cites a paper unreadable by all five routes; the cytoplasmic pool is BY SIMILARITY from mouse and is AF17/MLLT6-driven and CRM1-dependent in mouse kidney.
compartment subnuclearperi-nucleolar heterochromatin, as the site of the DOT1L-NPM1 proximity signal, in mouse N2a neuroblastoma overexpressing FLAG-DOT1L; nothing in any leukaemia cell
shown for fusionPARTLY - endogenous DOT1L has been imaged, nuclear, in THP-1 (KMT2A::MLLT3) as a supporting figure of a study about an lncRNA (PMID 38374003). No study is ABOUT DOT1L localisation in a KMT2A-rearranged cell, no subnuclear marker co-stain exists there, and nothing addresses a cytoplasmic pool in a blast.
endogenous protein imagedtrue
patient material datafalse
export receptorCRM1/XPO1 (leptomycin-B sensitive) when AF17/MLLT6 is in excess, in mouse renal cells
bounded absence date2026-09-20
rule80 correctionThe bounded absence originally recorded here was falsified within the same session by opening the single title-checked-and-dismissed hit. A PubMed count is bounded by abstracts, not by papers.
uniprot evidence codes
{
  "Nucleus": "ECO:0000269|PubMed:15851025 (full text unreadable by all five routes, 2026-09-20)",
  "Cytoplasm": "ECO:0000250|UniProtKB:Q6XZL8 - BY SIMILARITY, not measured in human",
  "note_cytoplasmic_via_MLLT6_AF17": "ECO:0000250|UniProtKB:Q6XZL8; the mouse entry attributes it to PubMed:22087315"
}
methods
[
  "immunofluorescence colocalisation (mouse mIMCD3)",
  "overexpression/knockdown plus fractionation-free IF (mouse M-1)",
  "leptomycin B nuclear-export block",
  "proximity ligation assay with compartment marker (mouse N2a)",
  "immuno-FISH for major satellite repeats"
]
antibody reagents named in sources
[
  {
    "target": "FLAG (tagging overexpressed DOT1L)",
    "reagent": "ab95045 (Abcam, goat)",
    "use": "PLA",
    "source_pmid": "37759327"
  },
  {
    "target": "NPM1",
    "reagent": "ab10530 (Abcam, mouse)",
    "use": "PLA / IF",
    "source_pmid": "37759327"
  },
  {
    "target": "fibrillarin (nucleolar marker)",
    "reagent": "ab184817 (Abcam, rabbit)",
    "use": "IF compartment marker",
    "source_pmid": "37759327"
  },
  {
    "target": "lamin B1 (nuclear periphery marker)",
    "reagent": "ab133741 (Abcam, rabbit)",
    "use": "IF compartment marker",
    "source_pmid": "37759327"
  },
  {
    "target": "H3K79me2",
    "reagent": "ab3594 (Abcam, rabbit)",
    "use": "IF / western / ChIP",
    "source_pmid": "37759327"
  },
  {
    "target": "DOT1L",
    "reagent": "CST #90878S (rabbit); secondary DIG-FITC Abcam ab119349 and goat anti-rabbit DyLight 647 Abcam ab150115; Zeiss LSM7 DUO NLO confocal",
    "use": "immunofluorescence combined with RNA/DNA FISH in THP-1",
    "source_pmid": "38374003"
  }
]
species and systems
[
  "human THP-1 (KMT2A::MLLT3)",
  "mouse M-1 cortical collecting duct",
  "mouse mIMCD3 renal collecting duct",
  "mouse Neuro-2a neuroblastoma",
  "human 293T (prior work cited in PMID 22087315)"
]
How this could bite us back
  • If a cytoplasmic DOT1L pool exists in human leukaemia cells, a catalytic inhibitor such as pinometostat engages it too, and the fraction of drug consumed by a non-chromatin pool is unmeasured - a possible contributor to the gap between target engagement and clinical response.
  • Peri-nucleolar heterochromatin and major-satellite repression are DOT1L-sensitive in mouse N2a. A DOT1L inhibitor therefore risks derepressing satellite repeats, an innate-immune trigger, in tissues other than the tumour.
  • The by-similarity cytoplasmic annotation is the exact kind of fact that gets imported into a target dossier and then cited as if measured. Any pharmacodynamic assay designed around 'nuclear versus cytoplasmic DOT1L' in patients would rest on mouse kidney data.
  • Because no image exists, there is no baseline against which to detect drug-induced relocalisation - so a resistance mechanism that works by moving DOT1L rather than by mutating it would currently be invisible.
Still open
  1. Does DOT1L have a cytoplasmic pool in a leukaemic blast? The by-similarity annotation says mouse Dot1a leaves the nucleus when AF17 is in excess; the one image in a KMT2A-rearranged cell is a focal nuclear co-localisation panel that could not have shown a diffuse cytoplasmic pool even if one were there.
  2. Where is DOT1L relative to subnuclear compartments in a KMT2A-rearranged cell? No nucleolar, speckle, PML-body or lamina marker has ever been co-stained with DOT1L in this disease.
  3. Does the CALM-derived CRM1 nuclear export signal move DOT1L, or only the fusion? Leptomycin B blocks Dot1a export in mouse kidney; CALM-AF10 requires CRM1; nobody has asked whether these are the same traffic.
  4. Is AF17/MLLT6 expressed at a level capable of exporting DOT1L in a KMT2A-rearranged blast, and does AF10/MLLT10 do the same thing or the opposite?
  5. Does DOT1L sit at peri-nucleolar heterochromatin in a leukaemic nucleus as it does in mouse N2a - and if so, is that where the global H3K79me2 loss seen in CALM-AF10 disease is concentrated?
Every source behind this entry (7)
  1. E1established confidence 5 of 5: Multiple independent lines of evidence; treated as settled in the field.database

    UniProt Q8TEK3 (human DOT1L, 1537 aa) annotates Nucleus with ECO:0000269|PubMed:15851025 and Cytoplasm with ECO:0000250|UniProtKB:Q6XZL8, i.e. the cytoplasmic pool is transferred by similarity from the mouse entry rather than measured in human protein, with the note that cytoplasmic localisation is dependent on and mediated by MLLT6/AF17 carrying the same by-similarity code.

    What this evidence cannot show

    A database record, not an experiment. Resolution followed the brief's identifier rules: gene_exact:DOT1L AND organism_id:9606 AND reviewed:true returned exactly one reviewed record whose gene_primary is DOT1L, accession Q8TEK3, length 1537, matching the length already asserted in gene-dot1l. Evidence codes were read from the JSON evidences array rather than from the flat text, because the flat text renders both codes identically to a casual reader.

    Evidence that argues against this (1)
    • A by-similarity annotation is not wrong, it is unmeasured. Mouse and human DOT1L are 1540 and 1537 residues and the AF17-binding region is conserved, so the transfer is reasonable. The failure mode this entry guards against is not the annotation - it is an automated import writing 'DOT1L is cytoplasmic' into a human leukaemia entry with no marker that the observation is murine, renal and overexpression-driven.
  2. E2moderate confidence 3 of 5: One strong study, or several smaller consistent ones.paper

    In mouse cortical collecting duct M-1 cells, overexpression of AF17 (MLLT6) led to preferential distribution of Dot1a in the cytoplasm, an effect blocked by the nuclear export inhibitor leptomycin B, while siRNA depletion of AF17 caused nuclear accumulation of Dot1a; the functional readout was ENaC subunit expression and benzamil-sensitive Na+ transport.

    What this evidence cannot show

    Mouse renal collecting-duct epithelium, not human and not haematopoietic. The cytoplasmic pool is produced by OVEREXPRESSING AF17, so it reports what AF17 can do to Dot1a, not where endogenous Dot1a sits at native stoichiometry. Leptomycin B is a covalent CRM1 inhibitor with pleiotropic effects on nucleocytoplasmic traffic. Read: abstract only (PubMed efetch, 2026-09-20).

    Evidence that argues against this (1)
    • The converse experiment - whether AF17 loss changes DOT1L localisation in a leukaemia cell, where AF10/MLLT10 rather than AF17/MLLT6 is the dominant DOT1L partner - has not been done. MLLT6 and MLLT10 are paralogous octapeptide-motif/leucine-zipper DOT1L binders, and it is not established that the export behaviour is a property of AF17 specifically rather than of that binding mode, which would make it relevant to AF10-containing fusions as well.
  3. E3moderate confidence 3 of 5: One strong study, or several smaller consistent ones.paper

    In mouse mIMCD3 renal collecting duct cells, Dot1a and AF9 interact and colocalise in the nucleus, and both are found at the ENaCalpha promoter by chromatin immunoprecipitation.

    What this evidence cannot show

    Mouse renal epithelium and an aldosterone-signalling question; the colocalisation is nuclear-versus-cytoplasmic resolution, not subnuclear. AF9 here is acting as a transcriptional repressor partner in kidney, the opposite of its role in the leukaemic SEC, so this system should not be used to reason about the leukaemic complex. Read: abstract only (PubMed efetch, 2026-09-20).

    Evidence that argues against this (1)
    • The same Dot1a-AF9 pairing that this paper shows repressing ENaCalpha in kidney is, in leukaemia, read as an activating recruitment module. A protein pair can colocalise in the nucleus of two cell types and do opposite things; nuclear colocalisation is therefore weak evidence about mechanism even when it is strong evidence about compartment.
  4. E4moderate confidence 3 of 5: One strong study, or several smaller consistent ones.paper

    In mouse Neuro-2a neuroblastoma cells overexpressing FLAG-tagged DOT1L, a proximity ligation assay between FLAG and NPM1 read out against fibrillarin and lamin B1 places the DOT1L-NPM1 interaction at peri-nucleolar heterochromatin, and immuno-FISH shows that NPM1 knockdown or DOT1L overexpression changes the number and size of peri-nucleolar major-satellite foci; neither DOT1L overexpression nor EPZ5676 inhibition altered NPM1 localisation.

    Nucleophosmin 1 cooperates with the methyltransferase DOT1L to preserve peri-nucleolar heterochromatin organization by regulating H3K27me3 levels and DNA repeats expression. · Izzo A, Akol I, Villarreal A, Lebel S, Garcia-Miralles M, Cheffer A, Bovio P, Heidrich S, Vogel T · Epigenetics Chromatin 2023
    What this evidence cannot show

    Mouse N2a neuroblastoma, transient transfection, DOT1L OVEREXPRESSED and FLAG-tagged - so the imaged species is not endogenous DOT1L and the compartment assignment is of an interaction, not of the protein alone. Antibodies used (rule 74): FLAG goat ab95045, NPM1 mouse ab10530, fibrillarin rabbit ab184817, lamin B1 rabbit ab133741, H3K79me2 rabbit ab3594. A PLA signal reports proximity within roughly 40 nm, not binding, and its compartment assignment inherits the resolution of confocal microscopy. Read: full text via Europe PMC PMC10537513, 2026-09-20.

    Evidence that argues against this (1)
    • The paper's own negative bounds the claim: DOT1L overexpression and DOT1L catalytic inhibition both left NPM1 localisation unchanged. So whatever DOT1L is doing at the peri-nucleolar compartment, it is not organising NPM1, and the heterochromatin reorganisation runs through H3K27me3 rather than through a DOT1L-dependent relocation of the nucleolar scaffold. A reader should not take 'DOT1L is peri-nucleolar' as 'DOT1L builds the peri-nucleolar compartment'.
  5. E5moderate confidence 3 of 5: One strong study, or several smaller consistent ones.paper

    The human nuclear annotation for DOT1L cites Okada et al. 2005, whose abstract reports no localisation experiment, and whose full text could not be read on 2026-09-20 by any of the five routes in the standing brief.

    hDOT1L links histone methylation to leukemogenesis. · Okada Y, Feng Q, Lin Y, Jiang Q, Li Y, Coffield VM, Su L, Xu G, Zhang Y · Cell 2005
    What this evidence cannot show

    KNOWN BUT UNREADABLE, recorded per the brief's third case. Routes tried 2026-09-20: (1) Europe PMC core for EXT_ID:15851025 returns no pmcid; (2) cross-check of efetch db=pubmed for <ArticleId IdType="pmc"> also returns none, so routes 2-4 cannot be attempted; (5) curl -sL https://doi.org/10.1016/j.cell.2005.02.020 with a browser User-Agent returned 11 stripped characters ('Redirecting'), the documented Elsevier stub. This entry therefore does NOT assert what the paper's localisation data show; it asserts that the annotation has a source and that the source was not read here.

    Evidence that argues against this (1)
    • The unread source could well contain a clean human immunofluorescence result that would make the nuclear annotation stronger than this entry treats it. The honest position is symmetric: not reading a paper is not evidence against it. What the entry can say is that the nuclear annotation cannot be audited from open sources, and that a graph relying on it should say so.
  6. E6moderate confidence 3 of 5: One strong study, or several smaller consistent ones.database

    Bounded absence, NARROWED after a rule-80 full-text check on 2026-09-20: no study is about DOT1L localisation in a KMT2A-rearranged cell, no study has co-stained DOT1L with a subnuclear compartment marker in one, and no study has tested whether DOT1L has a cytoplasmic pool in a leukaemic blast. The broader claim that DOT1L has never been imaged in a KMT2A-rearranged cell is FALSE and is withdrawn - see E7.

    What this evidence cannot show

    QUERY: `(DOT1L[tiab] OR DOT1-like[tiab] OR hDOT1L[tiab] OR Dot1a[tiab]) AND (MLL[tiab] OR KMT2A[tiab] OR leukemia[tiab] OR leukaemia[tiab]) AND (immunofluorescence[tiab] OR confocal[tiab] OR "subcellular localization"[tiab] OR "subnuclear"[tiab] OR "nuclear localization"[tiab])` = 1 record, PMID 38374003. RULE 67 POSITIVE CONTROL through the same shape: `DOT1L[tiab] AND (immunofluorescence[tiab] OR confocal[tiab])` = 12, so the instrument returns ones. NAME LIST searched: DOT1L, hDOT1L, DOT1-like, Dot1a; KMT4 not searched. RULE 80, AND THIS IS WHY THE FIRST VERSION OF THIS ITEM WAS WRONG: the single hit was title-checked and dismissed as off-topic, and its FULL TEXT contains the measurement. A PubMed count is bounded by abstracts, not by papers, and a localisation panel is almost always a supporting figure in a paper about something else. The narrowed claim above is bounded by abstracts PLUS one full text; other supporting figures in the wider DOT1L literature were not searched, so even the narrowed claim should be read as 'not announced anywhere and not found in the one paper I opened'.

    Evidence that argues against this (1)
    • E7 is the direct counter to the original version of this item and is recorded as evidence rather than as a note, because it is a positive finding. The general lesson is the transferable part: this graph's absence claims about IMAGING are systematically more fragile than its absence claims about other things, because imaging is rarely the subject of a title.
  7. E7moderate confidence 3 of 5: One strong study, or several smaller consistent ones.paper

    Fluorescence in-situ hybridisation combined with immunofluorescence in THP-1 cells, a human leukaemia line carrying KMT2A::MLLT3 (MLL-AF9), shows endogenous DOT1L protein co-localised with LAMP5-AS1 lncRNA and the LAMP5 locus within the cell nucleus.

    Blockade of the lncRNA-DOT1L-LAMP5 axis enhances autophagy and promotes degradation of MLL fusion proteins. · Chen TQ, Huang HJ, Zhu SX, Chen XT, Pu KJ, Wang D, An Y, Lian JY, Sun YM, Chen YQ, Wang WT · Exp Hematol Oncol 2024
    What this evidence cannot show

    This is a SUPPORTING figure (Fig. 4h) in a paper about an lncRNA and autophagic degradation of MLL fusion proteins; localisation is not its subject and it is not announced in the title or abstract, which is why an abstract-bounded search missed it. RULE 74: DOT1L primary antibody CST #90878S (rabbit), detected with DIG-FITC (Abcam ab119349) and goat anti-rabbit DyLight 647 (Abcam ab150115), imaged on a Zeiss LSM7 DUO NLO confocal; no DOT1L-knockout or knockdown specificity control for the IF is described. The readout is co-localisation with an RNA FISH signal at one locus, so it establishes that DOT1L is nuclear and present at LAMP5 - it is NOT a compartment survey, there is no nucleolar, speckle, PML or lamina marker, and it says nothing about a cytoplasmic pool. RULE 73: THP-1 is a human MONOCYTIC line carrying KMT2A::MLLT3, not infant B-lineage KMT2A::AFF1; the paper's other lines are MV4-11 (KMT2A::AFF1) and MOLM-13 (KMT2A::MLLT3), but the FISH/IF is stated as THP-1. Read: full text via Europe PMC PMC10877858, 2026-09-20.

    Evidence that argues against this (1)
    • A co-localisation panel designed to show an RNA-protein-locus relationship is optimised for that signal, not for reporting the protein's distribution: exposure and thresholding chosen to display a focal overlap routinely suppress diffuse and low-abundance pools, including a cytoplasmic one. So this figure cannot be used to argue that DOT1L is ONLY nuclear in a KMT2A-rearranged cell, which is the question the by-similarity cytoplasmic annotation actually raises.
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